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+ | ====== David Lee ====== | ||
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+ | {{ :cathteam:david_lee.jpg| }} | ||
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+ | ===== Post Doctoral Research Fellow ===== | ||
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+ | I work for the [[http://www.mcsg.anl.gov/|Midwest Center for Structural Genomics (MCSG)]]. My responsibilities include selecting protein targets for structure determination, monitoring the success of target selection strategies, and providing homology models of relatives of MCSG structures. | ||
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+ | ===== Academic Background ===== | ||
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+ | 1985 BSc in Biochemistry at UCL | ||
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+ | 1988 Fellowship of the Institute of Medical Laboratory Science (Virology) at NESCOT while working at the Royal Free Hospital | ||
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+ | 1995 Part-time MSc in Computer Modelling of Molecular and Biological Processes at Birkbeck (Distinction) | ||
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+ | 1999 PhD with Julia Goodfellow at Birkbeck | ||
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+ | For my PhD I used various computational approaches to model the conformational change in transferrin that accompanies release of iron in response to a reduction in pH. | ||
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+ | {{:cathteam:transferrin.gif|}} | ||
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+ | After hypothesizing a mechanism of action I succeeded in simulating a small conformational change using molecular dynamics. This exhibited some of the correct features; in particular there was a hinge axis between the two halfs of the domain and it almost intersected with the crystallographic hinge axis. | ||
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+ | ===== Current Research Interests ===== | ||
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+ | Protein function prediction. I am pursuing an approach to target selection in structural genomics that targets representatives of the functional diversity of protein domain sequences predicted to belong to large structural superfamilies. | ||
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+ | ===== Selected Publications ===== | ||
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+ | {{pubmed>long:18037900}} | ||
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+ | {{pubmed>long:16524831}} | ||
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+ | {{pubmed>long:16481312}} | ||
+ | |||
+ | {{pubmed>long:16381865}} | ||
+ | |||
+ | {{pubmed>long:15768405}} | ||
+ | |||
+ | {{pubmed>long:15608188}} | ||
+ | |||
+ | {{pubmed>long:15128436}} | ||
+ | |||
+ | {{pubmed>long:14681381}} | ||
+ | |||
+ | {{pubmed>long:12938085}} | ||
+ | |||
+ | {{pubmed>long:12831888}} | ||
+ | |||
+ | {{pubmed>long:12520054}} | ||
+ | |||
+ | {{pubmed>long:11875040}} | ||
+ | |||
+ | {{pubmed>long:11790833}} | ||
+ | |||
+ | {{pubmed>long:11788987}} | ||
+ | |||
+ | {{pubmed>long:11125098}} | ||
+ | |||
+ | {{pubmed>long:11125070}} | ||
+ | |||
+ | {{pubmed>long:10592246}} | ||
+ | |||
+ | ===== Other Interests ===== | ||
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+ | Most of my free time is spent helping out my partner with her horse. | ||
+ | |||
+ | ===== Other CATH Team Members ===== | ||
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+ | ~~DIR?cols=page;description&hdrs=Person; Description~~ | ||
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