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data:cathdomainpdb [2008/09/08 17:29] sillitoe |
data:cathdomainpdb [2008/09/08 17:29] (current) sillitoe |
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+ | ====== Cath Domain PDB File: (DomPDB) ====== | ||
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+ | Cath Domain PDB (or DomPDB) files are text files that contain just the PDB ATOM records that correspond to the residues of a particular CATH domain. These are useful as they can provide the input for protein structure viewers to examine individual CATH domains, or by structure comparison algorithms to compare domains. | ||
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+ | [[http://data.cathdb.info/v3_2_0/dompdb/1cukA01]] | ||
+ | |||
+ | <code> | ||
+ | ATOM 1 N MET 1 -7.750 -4.498 -20.265 1.00 21.82 | ||
+ | ATOM 2 CA MET 1 -7.178 -5.177 -19.122 1.00 18.39 | ||
+ | ATOM 3 C MET 1 -7.857 -4.686 -17.798 1.00 20.00 | ||
+ | ATOM 4 O MET 1 -8.202 -5.472 -16.932 1.00 18.10 | ||
+ | ... | ||
+ | </code> | ||
+ | |||