CATH

release_notes - [CATH-Plus Version 4.4]

sillitoe (sillitoe@undisclosed.example.com) — 2025-01-28T14:00:58+00:00

CATH Release Notes The CATH database is constantly being updated through automated algorithms and manual curation. The most up-to-date annotations can be found in the CATH daily snapshots where we provide a limited amount of information (domain boundaries and superfamily assignments) for the very latest snapshot of the current database.

index - [Expansion in CATH structural data from AlphaFold Database]

sillitoe (sillitoe@undisclosed.example.com) — 2024-11-26T14:54:03+00:00

What is CATH? The CATH database is a free, publicly available online resource that provides information on the evolutionary relationships of protein domains. It was created in the mid-1990s by Professor Christine Orengo and colleagues, and continues to be developed by the

index

vwaman (vwaman@undisclosed.example.com) — 2023-09-29T13:40:30+00:00

Data curation : Domain Chopping (DomChop) tutorial (last updated August, 2023) (Tutorial documented by: Dr. Natalie Dawson and Dr. Vaishali Waman; DomChop webpage created by Dr. Ian Sillitoe) What is domain chopping? Domain chopping (DomChopping) is the process of 'chopping' polypeptide chains from the Protein Data Bank (PDB) into one or more protein structure domains.

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vwaman (vwaman@undisclosed.example.com) — 2023-09-28T16:24:30+00:00

Superfamily Naming exercise (Last updated in Sept 2023) Useful websites: Part I: Steps followed for naming a superfamily * Look through representative domains as: ‘domain only’ to understand common secondary structures; as ‘domain in chain’ to observe the location of the domain in the chain; as ‘domain in PDB’ to understand the domain’s function and location in the protein.

ssap_litemol.png - created

sayoni (sayoni@undisclosed.example.com) — 2017-10-24T11:09:24+00:00

4ig6_uploaded_to_cath.png - created

sayoni (sayoni@undisclosed.example.com) — 2017-10-24T08:12:42+00:00

3.20.20.120.rainbow.png

sayoni (sayoni@undisclosed.example.com) — 2017-10-16T16:27:24+00:00

gene3d-qars-mutations.png

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T14:24:11+00:00

gene3d-domain-funfam-page.png - created

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T14:17:06+00:00

aldolase-funfam-structure.png - created

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T13:45:45+00:00

aldolase-funfam-summary.png

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T13:28:02+00:00

ssap_screenshot.png

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T13:05:58+00:00

4i6g-cathedral-results.png - created

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-21T12:41:27+00:00

go-ec.png - created

nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-20T16:06:57+00:00

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nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-20T16:03:43+00:00

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nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-20T13:25:33+00:00

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nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-20T12:57:10+00:00

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nataliedawson (nataliedawson@undisclosed.example.com) — 2016-09-20T12:15:44+00:00

gene3d_hups_domain_freq.png - created

nataliedawson (nataliedawson@undisclosed.example.com) — 2015-10-12T16:52:52+00:00