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data:cathdomall [2008/09/16 08:02] garner |
data:cathdomall [2015/09/30 16:31] (current) sillitoe |
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| ====== Cath Domall File (CDF) ====== | ====== Cath Domall File (CDF) ====== | ||
| - | ===== Version 1.0 ===== | + | ===== Version 2.0 ===== |
| - | + | The CATH Domall file describes domain boundaries for entries in the CATH database. | |
| - | The Cath Domall file describes domain boundaries for entries in the CATH database. | + | All PDB chains in CATH that contain 1 or more domains have a CathDomall entry. Whole |
| - | Only PDB chains that have been split into domains have a CathDomall entry. | + | chain domains can be identified where the number of domains is 1 and the |
| - | Domains that are composed of whole PDB chains are not found in this file. | + | number of fragments is 0. |
| * Comment lines start with a '#' character | * Comment lines start with a '#' character | ||
| * Segments are continuous sequence regions of domains | * Segments are continuous sequence regions of domains | ||
| * Fragments are small regions of the protein chain that are excluded from the domain definition | * Fragments are small regions of the protein chain that are excluded from the domain definition | ||
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| ^ Column ^ Description ^ | ^ Column ^ Description ^ | ||
