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CATH Data
This page provides information on the data files that are available to download from CATH.
You can also look at the release notes for more information on what happened in each release.
Type | Description |
---|---|
CathDomainPdb | Library of chopped PDB files for representative CATH domains |
CathCathedral library | Library of domain secondary structure graphs for CATHEDRAL for representative CATH domains |
CathHmm | HMM library file for CATH domains |
CathHmm (+unclassified) | HMM library file for CATH domains (including those that are waiting to be classified) |
CathDomainDescriptionFile | Full description of CATH domains |
CathDomall | Domain boundaries for each PDB Chain in “domall” format |
CathUnclassifiedList | List of CATH domains that are waiting to be assigned |
Chains | List of PDB chains in CATH |
Domain Sequences (ATOM) | FASTA sequence database for all CATH domains (based on ATOM records in PDB) |
Domain Sequences (COMBS) | FASTA sequence database for all CATH domains (based on COMBS sequence data) |
CathDomainList | List of assigned CATH domains |
CathNames | List of manually assigned names of CATH classification nodes |
Representative Domain Sequences (ATOM) | FASTA sequence database for CATH domains (clustered at different levels of sequence identity) |
Representative Domain Sequences (COMBS) | FASTA sequence database for CATH domains (clustered at different levels of sequence identity) |
Representatives | List of CATH representative domains (representing clusters at different levels of sequence identity) |