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data:index [2017/10/12 16:06] sayoni removed text on CATH and CATH-Plus |
data:index [2017/10/14 16:28] (current) sillitoe |
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| This page provides information on the data files that are available to download from the [[ftp://orengoftp.biochem.ucl.ac.uk/cath | CATH FTP site]]. | This page provides information on the data files that are available to download from the [[ftp://orengoftp.biochem.ucl.ac.uk/cath | CATH FTP site]]. | ||
| - | See [[index#cath_releases|CATH Releases]] for more information on CATH and CATH-Plus. | + | See [[:index#cath_releases|CATH Releases]] for more information on CATH and CATH-Plus. |
| ===== CATH (daily snapshot) ===== | ===== CATH (daily snapshot) ===== | ||
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| ^ File name ^ Description ^ | ^ File name ^ Description ^ | ||
| - | | cath-dataset-nonredundant-S[20%%|%%40]-v4_1_0.atom.fa | The ATOM sequences of the domains in the dataset (which only contain residues that have ATOM records in the PDB file) | | + | | cath-dataset-nonredundant-S[20%%|%%40].atom.fa | The ATOM sequences of the domains in the dataset (which only contain residues that have ATOM records in the PDB file) | |
| - | | cath-dataset-nonredundant-S[20%%|%%40]-v4_1_0.fa | The sequences of the domains in the dataset | | + | | cath-dataset-nonredundant-S[20%%|%%40].fa | The sequences of the domains in the dataset | |
| - | | cath-dataset-nonredundant-S[20%%|%%40]-v4_1_0.list | A list of the domains in the dataset; one domain ID per line | | + | | cath-dataset-nonredundant-S[20%%|%%40].list | A list of the domains in the dataset; one domain ID per line | |
| - | | cath-dataset-nonredundant-S[20%%|%%40]-v4_1_0.pdb.tgz | (A gzipped tar file containing) the PDB files of the domains in the data set | | + | | cath-dataset-nonredundant-S[20%%|%%40].pdb.tgz | (A gzipped tar file containing) the PDB files of the domains in the data set | |
| ==== Sequence data ==== | ==== Sequence data ==== | ||
