The testing plugin is enabled and should be disabled.

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

release_notes [2016/07/12 18:08]
nataliedawson [CATH Release Notes]
release_notes [2017/10/14 16:22] (current)
sillitoe
Line 3: Line 3:
 The CATH database is constantly being updated through automated algorithms and manual curation. The CATH database is constantly being updated through automated algorithms and manual curation.
  
-The most up-to-date CATH annotations can be found in CATH-B where we provide a limited amount of information +The most up-to-date annotations can be found in the [[data:index | CATH daily snapshots]] where we provide a limited amount of information (domain boundaries and superfamily assignments) for the very latest snapshot of the current database.
-(domain boundaries and superfamily assignments) for the very latest snapshot of the current database.+
  
-We also provide major releases where we take a branch of the database +We also provide major releases (CATH-Plus) where we take a branch of the database 
-through the release process: adding internal checks, associating functional and sequence annotations, +through the full release process: adding internal checks, associating functional and sequence annotations, 
 creating datasets, and so on. creating datasets, and so on.
  
-[[ftp://ftp.biochem.ucl.ac.uk]]+Information from all releases can be downloaded from the [[data:index| Download]] page, general stats on each CATH-Plus release is provided below.
  
-===== CATH Version 4.1 =====+===== CATH-Plus Version 4.2 ===== 
 + 
 +**Based on PDB release: July 01, 2017** 
 + 
 +Changes since v4.1: 
 + 
 +  * 125,858 newly classified domains 
 +  * 24,765 newly processed PDBs 
 + 
 +^ Class   ^ Architecture  ^ Topology  ^ Homologous Superfamily  ^ S35 Family  ^ S60 Family  ^ S95 Family  ^ S100 Family  ^ Domains  ^ 
 +| Class 1 | 5  | 405  | 2174 | 7771  | 9948  | 12797 | 24176  | 90302  | 
 +| Class 2 | 21 | 244  | 1395 | 7011  | 9627  | 15169 | 26904  | 110260 | 
 +| Class 3 | 14 | 634  | 2428 | 16196 | 23313 | 29670 | 60020  | 229776 | 
 +| Class 4 | 1  | 108  | 122  | 311   | 399   | 542   | 876    | 4519   | 
 +| **TOTAL**   | **41** | **1391** | **6119** | **31289** | **43287** | **58178** | **111976** | **434857** | 
 + 
 +===== CATH-Plus Version 4.1 =====
  
 **Based on PDB release: Jan 01, 2015** **Based on PDB release: Jan 01, 2015**
Line 31: Line 46:
  
  
-===== CATH Version 4.0 =====+===== CATH-Plus Version 4.0 =====
  
 **Based on PDB release: March 26, 2013** **Based on PDB release: March 26, 2013**
Line 51: Line 66:
  
  
-===== CATH Version 3.5 =====+===== CATH-Plus Version 3.5 =====
  
 **Based on PDB release: Sept 20, 2011** **Based on PDB release: Sept 20, 2011**
Line 71: Line 86:
  
  
-===== CATH Version 3.4 =====+===== CATH-Plus Version 3.4 =====
  
 **Based on PDB release: Nov 13, 2010** **Based on PDB release: Nov 13, 2010**
Line 90: Line 105:
 | **Total** | **40** | **1282** | **2549** | **11330** | **15778** | **21325** | **41488** | **152920** | | **Total** | **40** | **1282** | **2549** | **11330** | **15778** | **21325** | **41488** | **152920** |
  
-===== CATH Version 3.3 =====+===== CATH-Plus Version 3.3 =====
  
 **Based on PDB release: July 7, 2009** **Based on PDB release: July 7, 2009**
Line 110: Line 125:
  
  
-===== CATH Version 3.2 =====+===== CATH-Plus Version 3.2 =====
  
 **Based on PDB release: July 14, 2008** **Based on PDB release: July 14, 2008**
Line 133: Line 148:
  
  
-===== CATH Version 3.1 =====+===== CATH-Plus Version 3.1 =====
  
 **Based on PDB release: 14 Jan, 2007** **Based on PDB release: 14 Jan, 2007**
Line 157: Line 172:
  
  
-===== CATH Version 3.0 =====+===== CATH-Plus Version 3.0 =====
  
 **Based on PDB release: 5 May, 2006** **Based on PDB release: 5 May, 2006**
Print/export